Changelog

Source: NEWS.md

Changes in version 1.5.2 (2023-05-24)

Major changes

Minor improvements and bug fixes

  • added aa2selfscore

Changes in version 1.5.1 (2023-05-22)

Major changes

Minor improvements and bug fixes

  • additional option to use asymmetric score matrix (symmetric=FALSE)
  • changed rcpp_distSTRING.cpp
  • changed rcpp_pairwiseDeletionAA.cpp
  • changed rcpp_pairwiseDeletionDNA.cpp
  • changed aastring2dist.R
  • changed dnastring2dist.R

Changes in version 1.3.1 (2022-11-08)

Major changes

Minor improvements and bug fixes

  • additional Genetic Codes into base.cpp

Changes in version 1.1.7 (2022-10-05)

Major changes

  • changed licence into GPL-3 to account for KaKs Calculator 2.0 licence

Minor improvements and bug fixes

Changes in version 1.1.6 (2022-09-22)

Major changes

Minor improvements and bug fixes

  • changed test-rcpp_KaKs

Changes in version 1.1.5 (2022-09-19)

Major changes

Minor improvements and bug fixes

  • changed rcpp_KaKs data access from data.frame to list

Changes in version 1.1.4 (2022-07-16)

Major changes

Minor improvements and bug fixes

  • fixed rcpp Warnings

Changes in version 1.1.3 (2022-07-11)

Major changes

Minor improvements and bug fixes

  • fixed rcpp indentation Warnings

Changes in version 1.1.2 (2022-07-05)

Major changes

  • Added KaKs Calculator 2.0 models as rcpp implementation

Minor improvements and bug fixes

  • fixed some typos

Changes in version 1.1.1 (2022-06-30)

Major changes

Minor improvements and bug fixes

  • Added cds2codonaln

Changes in version 0.99.3 (2022-03-18)

Major changes

Minor improvements and bug fixes

  • Fix RcppThread::LdFlags warning

Changes in version 0.99.2 (2022-01-28)

Major changes

Minor improvements and bug fixes

  • Added RcppThread::ProgressBar

Changes in version 0.99.1 (2022-01-27)

Major changes

  • Changed version number into 0.99.2

Minor improvements and bug fixes

  • Changed URL links in DESCRIPTION

Changes in version 0.99.0 (2021-12-22)

Major changes

  • Changed version number into 0.99.1

  • Changed name from distSTRING into MSA2dist

  • Submitted to Bioconductor

Minor improvements and bug fixes